DeepOmics

What is DeepOmics?

Digital Environmental Engineering Platform for OMICS data

Click HERE to access DeepOmics server!

DeepOmics is an on-line Information System for storing and querying data from environmental biotechnology processes, such as anaerobic digestion and activated sludge. This data can originate from laboratory reactors, pilots or full-scale plants.
The originality of DeepOmics lies in its ability to encompass and cross-reference operational data (process design and operational parameters, physico-chemical monitoring data), with meta-omic data on the characterization of microbial communities at the heart of the process.

DeepOmics thereby aims to facilitate the production of FAIR data and encourage the re-use of data for the purposes of knowledge production and the development of operational tools for the microbial management of processes.

Contact us!

Picture of Emilie Fernandez
event From 01 Dec. 2024 to 30 June 2025

Narbonne

Welcome to Emilie Fernandez, joining DeepOmics project in 2024-2025!

Emilie Fernandez is joining DeepOmics project as ontologist and software developper
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From 14 Nov. 2024 to 18 Nov. 2024

Antony and Narbonne, France

Joint datathon with INRAE PROSE and INRAE LBE

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A joint datathon was organized by INRAE PROSE and INRAE LBE for the users of DeepOmics and EnviBIS information systems.

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From 25 June 2024 to 28 June 2024

Toulouse, France

Poster presentations of DeepOmics at JOBIM 2024

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DeepOmics was presented as a poster by Véronique Jamilloux and Emilie Fernandez during JOBIM 2024, Journées ouvertes en biologie, informatique et mathématiques

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DeepOmics production server is now available!

What are the FAIR principles?

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Click here to know more about FAIR data principles!

DeepOmics in figures

Number of projects: 30

Number of users: 37

Number of .fastq files : 680

Updated on 12 January 2025